Presentations and Authors

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Investigation of a Nucleated-Polymerization Model applied to Polyglutamine Aggregation
Carola Kruse, Marie Doumic, H. Thomas Banks
Microbiology's N-body problem: How should we estimate the rate of metabolite exchange in spatially structured populations?
Robert J Clegg, Rosemary J Dyson, Jan-Ulrich Kreft
Dynamics of p53 in single cells: A spatio-temporal reaction-diffusion PDE model for activation and regulation of p53
Elias Jan, Luna Dimitrio, Jean Clairambault, Roberto Natalini
Measuring and modeling dynamics of VEGF retention in vascular patterning
Walter de Back
Modeling the Dynamics of Tumor Heterogeneity
Ruchira Datta
Evolutionary diversification in finite and in subdivided populations
Florence Debarre
Modeling HCV kinetics in vivo and in vitro indicates that the liver plays a role in HCV clearance
Harel Dahari
Spatial spread of hepatitis C virus in vivo and in vitro – analyzing single cell dynamics
Fredrik Graw, Harel Dahari, Ruy M. Ribeiro, Alan S. Perelson
A vRNA Structured Population Model of Hepatitis C Virus Dynamics
Wojciech Krzyzanski, Xavier Woot de Trixhe, Filip De Ridder, An Vermeulen
Understanding the paradoxical effects of katanin microtuble severing on the self-organisation of the plant cortical array
Eva E. Deinum, Simon H. H Tindemans, Bela M. Mulder
Soil-Root Interactions : Observations and modeling with a specific focus on water uptake
Claude Doussan
Modelling Root Growth with PDE. The C-root model
Yves Dumont, Thierry Fourcaud, Emilie Peynaud
Density-based approaches to interface models and data in root biology
Dimitris Kalogiros, Michael O. Adu, Xavier Draye, Mariya Ptashnyk, A. Glyn Bengougha, Lionel X. Dupuy
Image-based plant phosphate uptake modelling: a case study for root hairs using synchrotron X-ray CT imaging
Sam D. Keyes, Keith R. Daly, Neil Gostling, Alan Marchant, Ian Sinclair, Tiina Roose
Morpheus: User-friendly modeling of multicellular systems
Walter de Back
Modeling the cyanobacterial circadian clock
Sophie De Buyl
Mathematical modelling of the plant circadian clock
Mirela Domijan
Solution of the chemical master equation by the separation of variables and alternating optimization methods
Sergey Dolgov
Cellular automaton models for collective cell behaviour
Andreas Deutsch
Out with the new, in with the old
David Basanta, Arturo Araujo, Color Lynch, Leah Cook, Shilpa Gupta, Jasreman Dhillon, Jong Park, Julio Pow Sang
Stochastic approaches for understanding the impact of antibacterial drugs on bacteria population dynamics
Diana David-Rus
Emergence of Modularity in Biology
Michael Deem
Transcriptional bursting and bacterial adaptation
Ovidiu Radulescu, Cathy Royer, Nathalie Declerck
Insights into the evolution of drug resistance from simple models
Troy Day
Pathogen spread and control on the network of French cattle movements through coupling of intra- and inter-herd models
Elisabeta Vergu, Pauline Ezanno, B. L. Dutta
Modelling HIV virulence evolution in the context of immune escape
Christiaan H. van Dorp, Rob J. de Boer, Michiel van Boven
Incorporating immunological dynamics in transmission models of varicella zoster virus (VZV) and cytomegalovirus (CMV)
Michiel van Boven, Alies van Lier, Marjolein Korndewal, Jacco Wallinga, Hester de Melker
Combining a within host model for immune response and waning immunity with a population level transmission model
Wilfred de Graaf
Investigation of a Nucleated-Polymerization Model applied to Polyglutamine Aggregation
Carola Kruse, Marie Doumic-Jauffret, H.Thomas Banks
Enzyme-Limited Nucleated Polymerization Model of Prion Aggregation
Jason Karl Davis, Suzanne S. Sindi
Simulation of cell mechanics in a micropipette aspiration experiment using a highly detail model
Paul van liedekerke, Johannes Neitsch, Bart Smeets, Tim Odenthal, Herman Ramon, Dirk Drasdo