Presentations and Authors


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Track:
 

Evolution and populations genetics

Branching processes in random environment
Elena Evgenievna Dyakonova
Repair and not segregation of damage is the optimal unicellular ageing strategy
Robert J Clegg, Rosemary J Dyson, Jan-Ulrich Kreft
Non-monotonic effects of migration in subdivided populations
Pierangelo Lombardo, Luca Dall'Asta, Andrea Gambassi
The ecology of resistance – density dependent feedbacks to optimal investment
Ruairi Donnelly

Developmental Biology

Computational model of trichome spacing pattern formation on growing linear leaf blade
Ulyana Zubairova, Sergey Nikolaev, Alexey Doroshkov, Dmitry Afonnikov
A parameter study of a computational angiogenesis model suggests that limited Apelin sensitivity enables tip cells to lead sprouts
Margriet Palm, Marchien Dallinga, Erik van Dijk, Ingeborg Klaassen, Reinier Schlingemann, Roeland Merks
Application of systems biology approach to analyze the development of wheat leaf pubescence.
Alexey Vladimirovich Doroshkov, Ulyana Zubairova, Mikhail Genaev, Sergey Nikolaev, Tatyana Pshenichnikova, Dmitry Afonnikov

Cancer

Therapies targeting hypoxia reduce tumor volume and delay the malignant transition in gliomas
Alicia Martínez-González, Mario Durán-Prado, Gabriel F Calvo, Francisco J Alcaín, Luis A Pérez-Romasanta, Victor M Pérez-García
Mathematical modeling predicts exponential growth kinetics for metastases in the lymphatic vessels in the absence of vascularization
Ruth Elizabeth Griswold, Simona Podgrabinska, Suvendu Das, Boyce E. Griffith, Charles S. Peskin, Mihaela Skobe
Modelling the role of adhesion in the heterogeneous dynamics of cancer invasion
Pia Domschke, Dumitru Trucu, Alf Gerisch, Mark Chaplain
POD-DEIM Approach on Dimension Reduction of a Model of Chemotactic Bacteria Patterns in Semi-Solid Medium
Gabriel Dimitriu

Population Dynamics and Conservation Biology

Dynamics of spatial pattern networks in predator-prey systems
Josinaldo Menezes da Silva
Analysis of ecological time series using state-space models
María Soledad Castaño, Hèlene Guis, Jean Vaillant, Thomas Balenghien, Jean-Claude Delécolle, Thierry Baldet, David Pleydell
Global solvability and stability of equilibrium of multi-species model with cross diffusion
Herve Michel DJOUOSSEU TENKAM, Roumen Anguelov

Ecology

Mathematical modelling of seasonal migration
John Gerard Donohue, Petri Tomas Piiroinen
A fractional-order diffusion model to predict transgenic pollen dispersal
Emmanuel Hanert, Valentin Vallaeys, Rebecca Tyson, Eric Deleersnijder
Games of Corruption: How to Suppress Illegal Logging.
JoungHun Lee, Karl Sigmund, Ulf Dieckmann, Yoh Iwasa
Evolution of dispersal syndromes
Margarete Utz, Hannah Dugdale, Franjo Weissing, Jan Komdeur

Epidemics

STIs on dynamic partnership networks -- characterizing R_0
Ka Yin Leung, Mirjam Kretzschmar, Odo Diekmann
Combining statistical and dynamic modelling approaches to within-host analysis of Porcine Reproductive and Respiratory Syndrome (PRRS) virus infections
Zeenath Islam, Stephen C Bishop, Nicholas J Savil, Raymond R. R. Rowland, Joan K Lunney, Benjamin Trible, Andrea Doeschl-Wilson
Global dynamics of compartmental models for the spread of ectoparasite-borne diseases
Attila Dénes, Gergely Röst
Optimal treatment- and diagnostic strategies in the context of ‘treatment for prevention’ against HIV-1 in resource-rich and -poor settings
Sulav Duwal, Stefanie Winkelmann, Christof Schütte, Max von Kleist

Immunology

Signaling pathway and gene network regulation of NFkB and cytokine mRNA expression in Mastitis
Nicoline Y den Breems, Don Kulasiri

Physiology

Integrative modelling and experimental validation of ammonia detoxification after drug induced liver damage
Geraldine Celliere, Ahmed Ghallab, Sebastian Henkel, Stefan Hoehme, Freimut Schliess, Sebastian Zellmer, Jan Hengstler, Dirk Drasdo
Population-of-controllers model explains heterogeneous insulin secretion experiments
Andrea De Gaetano, Claudio Roberto Gaz, Pasquale Palumbo, Simona Panunzi
A simplified, geometrical approach to the PKPD of inhaled bronchodilators
Claudio Roberto Gaz, Andrea De Gaetano, Simona Panunzi, George Cremona, Beverley Patterson

Neuroscience

A one-dimensional moving-boundary model for tubulin-driven axonal growth
Stefan Diehl, Anders Heyden, Stefano Perna
"Mathematical modelling of the dynamics and the role of the lipid composition in Alzheimer’s disease"
Guido Santos Rosales, Mario Díaz, Néstor Torres

Regulatory Networks

A Mathematical Model of Intermolecular Autophosphorylation with an Application to Aurora B Kinase
Kevin Doherty
Early stage dynamics of miRNA-driven FFL depends upon miRNA action
Alexander M. Samsonov, Maria A. Duk, Maria G. Samsonova
Mathematical models of mi-RNA dependent gene regulation in experimental procedures
Jaroslaw Smieja, Marzena Dolbniak

Cell and Tissue Biophysics

Using mathematical models to exploit the potential of skin in non-invasive drug monitoring
K A Jane White, Begona Delgado-Charro
Swimming Patterns in Zoospores
Fordyce A. Davidson
The method of additional particles for models of self-assembly in multilevel biological systems
Ivan A Denisov, Peter I Belobrov

Minisymposia

Investigation of a Nucleated-Polymerization Model applied to Polyglutamine Aggregation
Carola Kruse, Marie Doumic, H. Thomas Banks
Microbiology's N-body problem: How should we estimate the rate of metabolite exchange in spatially structured populations?
Robert J Clegg, Rosemary J Dyson, Jan-Ulrich Kreft
Dynamics of p53 in single cells: A spatio-temporal reaction-diffusion PDE model for activation and regulation of p53
Elias Jan, Luna Dimitrio, Jean Clairambault, Roberto Natalini
Measuring and modeling dynamics of VEGF retention in vascular patterning
Walter de Back
Modeling the Dynamics of Tumor Heterogeneity
Ruchira Datta
Evolutionary diversification in finite and in subdivided populations
Florence Debarre
Modeling HCV kinetics in vivo and in vitro indicates that the liver plays a role in HCV clearance
Harel Dahari
Spatial spread of hepatitis C virus in vivo and in vitro – analyzing single cell dynamics
Fredrik Graw, Harel Dahari, Ruy M. Ribeiro, Alan S. Perelson
A vRNA Structured Population Model of Hepatitis C Virus Dynamics
Wojciech Krzyzanski, Xavier Woot de Trixhe, Filip De Ridder, An Vermeulen
Understanding the paradoxical effects of katanin microtuble severing on the self-organisation of the plant cortical array
Eva E. Deinum, Simon H. H Tindemans, Bela M. Mulder
Soil-Root Interactions : Observations and modeling with a specific focus on water uptake
Claude Doussan
Modelling Root Growth with PDE. The C-root model
Yves Dumont, Thierry Fourcaud, Emilie Peynaud
Density-based approaches to interface models and data in root biology
Dimitris Kalogiros, Michael O. Adu, Xavier Draye, Mariya Ptashnyk, A. Glyn Bengougha, Lionel X. Dupuy
Image-based plant phosphate uptake modelling: a case study for root hairs using synchrotron X-ray CT imaging
Sam D. Keyes, Keith R. Daly, Neil Gostling, Alan Marchant, Ian Sinclair, Tiina Roose
Morpheus: User-friendly modeling of multicellular systems
Walter de Back
Modeling the cyanobacterial circadian clock
Sophie De Buyl
Mathematical modelling of the plant circadian clock
Mirela Domijan
Solution of the chemical master equation by the separation of variables and alternating optimization methods
Sergey Dolgov
Cellular automaton models for collective cell behaviour
Andreas Deutsch
Out with the new, in with the old
David Basanta, Arturo Araujo, Color Lynch, Leah Cook, Shilpa Gupta, Jasreman Dhillon, Jong Park, Julio Pow Sang
Stochastic approaches for understanding the impact of antibacterial drugs on bacteria population dynamics
Diana David-Rus
Emergence of Modularity in Biology
Michael Deem
Transcriptional bursting and bacterial adaptation
Ovidiu Radulescu, Cathy Royer, Nathalie Declerck
Insights into the evolution of drug resistance from simple models
Troy Day
Pathogen spread and control on the network of French cattle movements through coupling of intra- and inter-herd models
Elisabeta Vergu, Pauline Ezanno, B. L. Dutta
Modelling HIV virulence evolution in the context of immune escape
Christiaan H. van Dorp, Rob J. de Boer, Michiel van Boven
Incorporating immunological dynamics in transmission models of varicella zoster virus (VZV) and cytomegalovirus (CMV)
Michiel van Boven, Alies van Lier, Marjolein Korndewal, Jacco Wallinga, Hester de Melker
Combining a within host model for immune response and waning immunity with a population level transmission model
Wilfred de Graaf
Investigation of a Nucleated-Polymerization Model applied to Polyglutamine Aggregation
Carola Kruse, Marie Doumic-Jauffret, H.Thomas Banks
Enzyme-Limited Nucleated Polymerization Model of Prion Aggregation
Jason Karl Davis, Suzanne S. Sindi
Simulation of cell mechanics in a micropipette aspiration experiment using a highly detail model
Paul van liedekerke, Johannes Neitsch, Bart Smeets, Tim Odenthal, Herman Ramon, Dirk Drasdo

Plenary talk

Statistics for networks with a view towards neuroscience
Mathisca de Gunst
Modelling the Kinetics of Protein Polymerization in Amyloid Diseases
Marie Doumic