Presentations and Authors

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Some issues in modeling the atherosclerosis process
Bérénice Grec, Bertrand Maury, Nicolas Meunier, Laurent Navoret, Annie RAOULT
Investigation of a Nucleated-Polymerization Model applied to Polyglutamine Aggregation
Carola Kruse, Marie Doumic, H. Thomas Banks
Co-evolutionary cycles in host-parasite interactions
Alex Best
The effect of linked selection on invasion and survival of locally beneficial mutations
Simon Aeschbacher, Reinhard Buerger
The interplay of infectivity that decreases with virulence and limited cross-immunity: (toy) models for respiratory disease evolution
Hans (J.A.J.) Metz
Modelling of blood flow and blood coagulation
Vitaly Volpert
Eco-evolutionary cycles of pathogen virulence under selective predation
Eva Kisdi
How specificity and epidemiology drive the co-evolution of static trait diversity in hosts and parasites
Andy White
Adam Moroz
Impact of extra-cranial venous anomalies on cerebral haemodynamics. Numerical study via a global model
Eleuterio Francisco Toro, Lucas Omar Muller
Relevance of the Voronoi domain partition for position-jump reaction-diffusion processes on nonuniform rectilinear lattices
Christian Adam Yates
Multi-resolution stochastic reaction-diffusion and fractional-diffusion methods with applications to pattern formation, brain tumor growth, and epidemics
Basil Bayati
Demographic and genetic structuring in spatial evolutionary epidemiology
Sylvain Gandon
Microbiology's N-body problem: How should we estimate the rate of metabolite exchange in spatially structured populations?
Robert J Clegg, Rosemary J Dyson, Jan-Ulrich Kreft
Individualised 1D haemodynamics simulations for endovascular procedures and blood flow stimulation
Sergey Simakov, Timur Gamilov, Yuri Ivanov
Pharmacokinetic/Viral Kinetic modeling of early viral kinetics in different Hepatitis C virus genotypes during Alisporivir monotherapy or in combination with Peg-IFN
Jeremie Guedj
Modeling Hollow Fibers Dialyzers
Angiolo Farina
Multiscale model for viral kinetics in patients with HCV under direct-acting antiviral therapy
Dimitra Bon, Anita Kohli, Anuoluwapo Osinusi, Shyamasundaran Kottilil, Eva Herrmann
Three-dimentional mathematical analysis of non-Newtonian blood flow and numerical simulation of its interactions in an atherosclerotic artery
Soumaya Boujena, Oualid Kafi, Nader El Khatib
Where signal and noise collide: qualitative effects of stochasticity on population fluctuations
Karen C. Abbott
Spatio-temporal modelling of gene regulatory networks and intracellular signalling pathways
Mark AJ Chaplain
Mathematical modeling of auxin transport in root meristem of pin mutants
Victoria V Mironova, Fedor Kazantsev
Collective-Risk dilemmas and Risky Climate Game
Maria Abou Chakra
Benchmarking analysis methods for live cell single particle tracking using simulated microscopy
Martin Lindén, Johan Elf
Tensor-structured treatment of the chemical master equation
Vladimir Kazeev
Tackling the construction of probability distributions arising in Bio-Chemical networks
Vikram Sunkara
Effective tensor-based methods for the solution of high-dimensional non-stationary problems with the application to the chemical master equation
Ivan Oseledets, Denis Kolesnikov
Modelling of platelet-fibrin clot formation in flow with a DPD-PDE method
Alen Tosenberger
Modelling and numerical simulation of cellular molecular signaling
Andrea Cangiani
Mathematical modelling of intracellular protein dynamics: the importance of active transport along microtubules
Z. Szymanska
Spatial stochastic simulation of intracellular pathways
A. Hellander
Spatio-temporal modelling of gene regulatory networks: transcription factors, negative feedback loops and oscillatory dynamics
M. Sturrock
Dynamics of p53 in single cells: A spatio-temporal reaction-diffusion PDE model for activation and regulation of p53
Elias Jan, Luna Dimitrio, Jean Clairambault, Roberto Natalini
Traveling wave like solutions to a singular model of kinase-receptor interaction on a sphere
Bogdan Andrzej Kazmierczak, Slawomir Bialecki
A mathematical model of clot growth in flowing blood
Jevgenija Pavlova, Antonio Fasano, João Janela, Adélia Sequeira
Optimal control applications in blood flow simulations
Jorge Tiago, Telma Guerra, Alberto Gambaruto, Adélia Sequeira
Effective Parameters in Population Genetic Models with Class Structure
Arndt Telschow, Yutaka Kobayashi
Towards a mathematical model for the atherosclerotic plaque formation
Jorge Tiago, Telma Silva, Adélia Sequeira, Rafael Santos
Collective cell movement
Michael Plank
Predicting microbial community assembly
William Sloan
Metagenomics data analysis using a latent block model: application to plant-microbial communities interactions in the rhizosphere
Julie Aubert
Combining kinetic modeling and transcriptomic analysis to study the resilience on a model cheese reduced ecosystem
Frédéric Fer, Jean-Marie Beckerich, Béatrice Laroche, Sébastien Gaucel, Julie Aubert
Epistasis and Natural Selection Shape the Mutational Architecture of Quantitative Traits
Reinhard Bürger
The effects of biocontrol on cyclic pest populations and its unexpected outcomes
Bret Elderd, James Reilly
Generalized mass action systems and positive solutions of polynomial systems with parameters
Georg Regensburger
Ruling out Hopf bifurcations in biochemical reaction networks
Casian Pantea
Numerical treatment of chemotaxis related heterogeneous dynamics arising in cancer invasion simulations
N. Kolbe
Does Organismal Complexity Favor the Evolution of Diversity?
Claus Rueffler
Patterns of Species Ranges, Speciation, and Extinction
Aysegul Birand
The biogeography of adaptive radiations and the geographic overlap of sister species
Mikael Pontarp
Niche conservatism through species turnover
Jörgen Ripa
Synergy of vacuolation and cell-cell repulsion in lumen formation
Sonja Boas, Roeland Merks
Cellular Potts Models for Cell Migration
Marco Scianna
Multiscale techniques in cancer modelling and treatment prediction: A Compucell3D approach
Gibin Powathil
Measuring and modeling dynamics of VEGF retention in vascular patterning
Walter de Back
The Cellular Potts Model in the context of Cell Surface Mechanics
Stan Maree
Image-based computational studies of shear-thinning effects in the progression of cerebral aneurysms
Adelia Sequeira
Mostafa Bendahmane
Time delays in stochastic models of evolutionary games
Jacek Miekisz
Combinatorial Aspects of Parker’s model
Chris Cannings
The optimal foraging game
Vlastimil Kivan
Cross-feeding as a game
Torbjörn Lundh
Game theory and adaptation of reproductive phenology to climate change in birds with dominance hierarchies
Jacob Johannsson
Evolutionary Exploration of the Finitely Repeated Prisoners Dilemma - The Effect of Out-of-Equilibrium Play
Kristian Lindgren
Natural selection under limited population growth. Replicator dynamics and eco-evolutionary feedback
Krzysztof Argasinski
Efficient data-driven simulation of infection spread in the Swedish cattle population
Stefan Widgren
Inferring global network properties from egocentric data with applications to epidemics
Tom Britton
Modeling animal disease spread: including several paths of disease spread in a bayesian data-driven approach
Uno Wennergren
Interface instabilities in bacterial biofilms
Laoshen Li
The role of quorum-sensing architecture in determining bacterial population behaviour
Sara Jabbari
An approach for pressure-induced mathematical modeling of bacterial pattern formation
Aenne Oelker
Mathematical modelling and numerical simulations of bacterial pattern formation in terms of a complex reaction-diffusion-system
Thomas Horger, Christina Kuttler, Barbara Wohlmuth
Moment-dynamics models for cell biology processes
Ruth Baker
Modeling the Dynamics of Tumor Heterogeneity
Ruchira Datta
Dynamics of diversity in spatially evolving populations
Jasmine Foo
Understanding the relative roles of intrinsic and extrinsic heterogeneity in glioblastoma
Jill Gallaher
A Mathematical Exploration of the Development and Therapeutic Implications of Anti-Cancer Drug Resistance
Jan Gevertz
Clonal evolution of human intestinal stem cell niches
Marnix Jansen
Radiation-induced bystander signals: Role of spatial effects in radiation response
Gibin Powathil
Quantifying the effect of spatially varying factors of resistance to radiation therapy in primary brain tumors: predictions from a patient-specific model
Russell C. Rockne
Tracking the invisible: a probabilistic approach to field cancerization in head and neck carcinoma
Marc Ryser
Rapid adaptation from standing variance and de novo mutation: a general deterministic approximation
Guillaume Martin
Evolutionary rescue of a pathogen: emergence of viral drug resistance
Helen Alexander
Modeling Distribution of Reads from Leukemic Cells DNA through Mixture of Truncated Poisson Distributions
Nicolas Flores Castillo
Revising the specialist and generalist predation hypotheses: examples from the Arctic
Frederic Barraquand, John-André Henden, Olivier Gilg, Rolf A Ims, Nigel G Yoccoz
Nonlinearities in continuous-space moment equation models: possible insights from Taylor expansions
Frederic Barraquand, David Murrell
Evolutionary diversification in finite and in subdivided populations
Florence Debarre
Low-dimensional representations of stochastic dynamics on discrete structures
Thomas Allan House
Message passing and moment closure for Susceptible-Infectious-Removed (SIR) epidemic dynamics on networks
Kieran Sharkey
Spatial correlations in a multi-species model
Deborah C Markham
Models for regeneration: reconciling pattern formation and growth
Hans Meinhardt
Stem Cells and Regeneration: Feedback, Niche, and Epigenetic Regulation
Qing Nie
A mathematical model for cell differentiation, as an evolutionary and regulated process
Fred Vermolen
A quantitative data-driven model of cell proliferation and cell migration in the axolotl spinal cord regeneration
Osvaldo Chara
Effect of various doses of alisporivir alone or in combination with Peg‐IFN on the early viral kinetics: a modeling approach
Jérémie Guedj, Thi Huyen Tram Nguyen, France Mentré, Micha Levi, Nikolai Naoumov, Jing Ju
Modelling ribavirin mode of action in a specifically designed clinical trial in patients with hepatitis C
Eva Herrmann
Modeling HCV kinetics in vivo and in vitro indicates that the liver plays a role in HCV clearance
Harel Dahari
Spatial spread of hepatitis C virus in vivo and in vitro – analyzing single cell dynamics
Fredrik Graw, Harel Dahari, Ruy M. Ribeiro, Alan S. Perelson
A vRNA Structured Population Model of Hepatitis C Virus Dynamics
Wojciech Krzyzanski, Xavier Woot de Trixhe, Filip De Ridder, An Vermeulen
Mechanism-based analysis of drug combination effects on HCV replication in Huh-7 cells
Shingo Iwami
Size matters: Mathematical modelling of the type‐1 interferon induction
Diana Clausznitzer, Lars Kaderali
Mathematical models of immune responses to hepatitis B virus infection
Stanca Ciupe, Ruy Ribeiro, Alan Parelson
A predator-prey model with time delay and the Mackey-Glass attractor
Gail Wolkowicz
Stabilizing population cycles with adaptive limiter control
Frank Hilker
Retinal Plasticity: Mathematical modelling of positional information of sub-apical neurons
Effects of dispersal and plant genotype on a cyclic herbivore population
Frederic Barraquand, Karen Abbott, Bret Elderd, Rebecca Tyson, Christina Cobbold
Stochastic processes of mutation, selection and growth in cancer: models and data
Marek Kimmel, Alexandra Jilkine, Cristian Tomasetti, Thomas McDonald, Tomasz Wojdyla
Coupling biochemical models to physics of transport in leaf physiology
Ansgar Bohmann, Andrés Chavarría-Krauser
Modeling of Zinc Uptake and Transport in Plant Roots
Juliane Claus, Andrés Chavarría-Krauser
Understanding the paradoxical effects of katanin microtuble severing on the self-organisation of the plant cortical array
Eva E. Deinum, Simon H. H Tindemans, Bela M. Mulder
Soil-Root Interactions : Observations and modeling with a specific focus on water uptake
Claude Doussan
Modelling Root Growth with PDE. The C-root model
Yves Dumont, Thierry Fourcaud, Emilie Peynaud
Modeling the mechanical regulation of morphogenesis in plants
Christophe Godin
Computational Modelling of Planar Cell Polarity in the Arabidopsis Root Epidermis
Bettina Greese, Markus Grebe, Henrik Jönsson
Understanding plant shoot development - a Computational Morphodynamics approach
Henrik Jönsson
Density-based approaches to interface models and data in root biology
Dimitris Kalogiros, Michael O. Adu, Xavier Draye, Mariya Ptashnyk, A. Glyn Bengougha, Lionel X. Dupuy
Image-based plant phosphate uptake modelling: a case study for root hairs using synchrotron X-ray CT imaging
Sam D. Keyes, Keith R. Daly, Neil Gostling, Alan Marchant, Ian Sinclair, Tiina Roose
At the crossroads: how auxin biases positioning of asymmetric cell divisions in the root meristem
Athanasius F M (Stan) Marée
Modeling a Plant Cell Wall: interactions between mechanics and biochemistry
Brian Seguin, Mariya Ptashnyk
The effect of geometry on morphogenesis in the Arabidopsis embryo
Richard S. Smith, George Bassel, Gabriella Mosca, Pierre Barbier de Reuille, Saiko Yoshida, Dolf Weijers
Introduction to SPP-models and description of the problem
Daniel Strömbom
Spatial "self-propelled particle" and non-spatial "reaction-network" models explain locust swarm cohesion
Christian Yates
Swarming at Mesoscopic Scales - The role of fluctuations
Pawel Romanczuk
Bifurcation dynamics in models for self-organised biological aggregations
Raluca Eftimie
Control Theory Based Approaches to Dynamic Network Analysis
James Anderson
Ultrasensitivity and concentration robustness in bifunctional enzyme systems
Ronny Straube
Ultrasensitivity in phosphorylation cycles with little substrate
Bruno Martins, Peter S. Swain
Robustness of MAPK signalling at various expression levels of Erk1/2
Franziska Witzel, Raphaela Fritsche-Guenther, Anja Sieber, Ricarda Herr, Nadine Schmidt, Sandra Braun, Tilman Brummer, Christine Sers, Nil Blütghen
Digital Clock Modelling
Ozgur E Akman
The sensitivity of oscillatory properties
Katharina Baum, Jana Wolf
Encoding of stimulus intensities by sequences of Ca2+ spikes
Kevin Thurley, Stephen C. Tovey, Gregor Moenke, Victora L. Prince, Abha Meena, Andrew P. Thomas, Alexander Skupin, Colin W. Taylor, Martin Falcke
The effect of T-cell homeostasis on solid and liquid tumors
Mark Robertson-Tessi, Derek Park, Adam Mailloux, Kimberly Luddy, Pearlie Burnette, Alexander Anderson
A mathematical model for effect of tumor stroma on rate of metastasis formation
Ardith El-Kareh, Timothy Secomb
Chaste: An open source C++ library for computational physiology and biology
Alexander Fletcher
Modeling tissues using CompuCell3D
Maciej Swat
EPISIM Platform: Graphical multi-scale modeling and simulation of multicellular systems
Thomas Sütterlin
CellSys: Modular software for physics-based tissue modelling in 3D
Tim Johann
Modeling animal tissues in VirtualLeaf: Towards an off-lattice Cellular `Potts’ model
Roeland Merks
Biocellion: Accelerating multicellular biological simulation
Ryan Tasseff
Morpheus: User-friendly modeling of multicellular systems
Walter de Back
Modeling the cyanobacterial circadian clock
Sophie De Buyl
Simple numerical techniques for reaction-diffusion on general geometry
Colin Macdonald
Mathematical modelling of the plant circadian clock
Mirela Domijan
Pattern formation in morphogenesis on evolving biological surfaces: Theory, numerics and applications
Anotida Madzvamuse
Solving diffusion equations on evolving surfaces defined by biological images
Tom Ranner
Multiscale modelling of cancer cell motility: a predictive model of adhesions, blebbing, and spreading
Melda Tozluoğlu
Biological signal processing with a genetic toggle switch
Georg Fritz
Pulse dynamics in two component, singularly perturbed reaction-diffusion equations
Frits Veerman
Moving interface and free boundary problems that arise in the study of cell motility
Chandrasekhar Venkataraman
Are circadian clocks limit cycle oscillators?
Didier Gonze
Role of Noise in Multistable Dynamics of a non-adiabatic Repressilator
Evgeny Volkov, Ilya Potapov, Boris Zhurov
Robust Concentration and Frequency Control in Oscillatory Homeostats
Peter Ruoff
Conditions for oscillations in the NF-kB pathway
Jana Wolf
Tensor-based parametric analysis of stochastic genetic regulatory network
Shuohao Liao
Solution of the chemical master equation by the separation of variables and alternating optimization methods
Sergey Dolgov
Linking adaptive dynamics to neutral variation
Régis Ferrière
Extending he canonical equation of adaptive dynamics to Mendelian populations with any population structure: replace the population size by the effective population size from population genetics
J.A.J. (Hans) Metz
An edema‐ based model for diffuse low‐grade gliomas under radiotherapy
M. Badoual
Investigation of the effect of phenotypic plasticity on tumor growth
Katrin Boettger
Linear dependency between residual tumor fraction and regression probability can provide decision support after partial resection of pilocytic astrocytoma
Thomas Buder
The influence of phenotypic switching on tumour growth rate and cell density profiles
Philip Gerlee
Modeling dose‐painting effects in radiotherapy by means of an agent based model
Juan Carlos López Alfonso
In‐silico glioma models: what can we take advantage for the clinical practice?
Alicia Martínez‐González
A data‐driven calibration of a nonlinear mechanistic model for DNA damage and repair: applications to radiosurgery and heavy ion irradiation treatment for glioblastoma
Russel Rockne
Quantifying changes in glioma biology with treatment using modeling of edema formation and clinical imaging
Kristin R. Swanson
Cellular automaton models for collective cell behaviour
Andreas Deutsch
Emergence of biological-like systems, e.g. Brownian motor, by reduction of effective temperature
Alex Fiegel
How to Understand Morphogen Gradients Development during Biological Development
Anatoly B. Kolomeisky
A Path-based Approach to Random Walks on Landscapes, with Applications to How Proteins Evolve New Function
Michael Manhart
Emergence of criticality in living systems through adaptation and evolution: Practice Makes Critical
Amos Maritan
Statistical mechanics of nucleosome crowding in yeast
Alexandre Morozov
Toxin-Antitoxin Battle in Bacteria
Namiko Mitarai
Moving at the air-water interface
Adhesion of membranes via receptor-ligand complexes: Binding cooperativity, domain formation and line tension effects
Bartosz Rozycki
Regulating Looping in
Anirvan Sengupta
Mechanistic models of multicellular computation
David Swab
Spatial heterogeneity in drug concentrations can facilitate the emergence of resistance to cancer therapy
Feng Fu
An evolutionary model of micrometastatic progression: are driver mutations in the primary tumor important?
Christopher McFarland
Cell Trafficking Evolutionary Model for Metastatic Breast Cancer
Jeffrey West
One-dimensional model of cytoskeleton dynamics: application to interstitial migration
M.T. Sanchez
Molecular mechanisms underlying Xenopus retinal stem cell proliferation
On the understanding of avian photoreceptor mosaics development
Retinal angiogenesis and vascular pathology in response to hypoxia
A Combined Experimental and Numerical Study of Guidance Cues in the Developing Murine Retina
The role of VEGF-C and CCR7/CCL21 in Tumor Lymphangiogenesis.
Mechanisms of lymphangiogenesis and metastasis
Yihai Cao
Mathematical modeling predicts exponential growth of metastases in lymphatic vessels
Dendritic cell chemotaxis in physiological matrices in well-defined 3D gradients reveals differential response to CCL21 vs. CCL19
Ulrike Haessler
Inflammatory lymphangiogenesis and identification of new lymphangiogenic mediators
Cornelia Halin
Role of the extracellular matrix and lymphatics in fluid volume regulation
Helge Wiig
Stochastic Modeling of Prion Protein Dynamics and Transmission in Yeast
Suzanne Sindi
Distinguishing between mean-field, moment dynamics and stochastic descriptions of birth death movement processes
Matthew Simpson
Clinically Relevant Mathematical Models of Cancer
Alexander R.A Anderson
Optimization of radiation schedules for proneural gliomas via mathematical modeling
Kevin Leder, Ken Pitter, Eric Hollande, Franziska Michor
Out with the new, in with the old
David Basanta, Arturo Araujo, Color Lynch, Leah Cook, Shilpa Gupta, Jasreman Dhillon, Jong Park, Julio Pow Sang
Mathematical Neuro-Oncology: Translating Patient-specific Mathematical Modeling of Brain Tumors to Clinical Care
Kristin Swanson
Within-tumour diversity as a universal biomarker of prognosis
Trevor Graham
Evolutionary games in cancer therapy
Robert Gatenby
Simple numerical techniques for reaction-diffusion on general geometry.
Colin Mcdonald
Power spectra of stochastic reaction-diffusion equations on stochastically growing domains
Thomas Wooley
A Computational Model for Eukaryotic Cell Migration and Chemotaxis
John MacKenzie, R.H Insall, M Nolan
Pattern formation on curved surfaces: an analytical exploration
Frist Veerman
Plasticity of cancer cell migration: Extracellular matrix derives the optimisation of blebbing, adhesions, and spreading.
Melda Tozluoglu
Stochastic approaches for understanding the impact of antibacterial drugs on bacteria population dynamics
Diana David-Rus
Emergence of Modularity in Biology
Michael Deem
Thermodynamic limits on noisy cellular sensing
Sorin Tanase-Nicola
Adhesion of membranes via receptor-ligand complexes: Binding cooperativity, domain formation and line tension effects
Bartosz Ryzycki
Transcriptional bursting and bacterial adaptation
Ovidiu Radulescu, Cathy Royer, Nathalie Declerck
Uncovering the Natural History of Metastatic Cancer from Autopsy Data
Leonid Hanin
The specificity-abundance relationship in microbial communities.
Mahendra Mariadassou, Samuel Pichon, Dieter Ebert
Energetics and evolution.
T.P. Curtis, L. Øvreås, W:T Sloan
Metagenomic data analysis and integration in a functional population model of fiber degradation by the human intestinal microbiota.
Béatrice Laroche, Marion Leclerc, Sébastien Raguideau
Combining kinetic modeling and transcriptomic analysis to study the resilience on a model cheese reduced ecosystem
Frédéric Fer, Jean-Marie Beckerich, Sébastien Gaucel, Julie Aubert, Béatrice Laroche
Analysis of open chemical reaction networks governed by mass-action kinetics
Bayu Jayawardhana
Elimination of Intermediate Species in the Stochastic Reaction Networks
Daniele Cappelletti
Ruling out Hopf bifurcations in biochemical reaction networks
Casian Pantea
Complex concentration coupling in chemical reaction networks
Zoran Nikoloski, Jost Neigenfind
Graph-theoretic conditions for multistationarity for mass-conserved biochemical networks
Maya Mincheva
Implicit dose-response curves
Mercedes Pérez Millán
A multi-locus, haploid-selection, symmetric-viability model
Jeffrey Chasnov
Multidimensional models of rapid adaptation to shifting environmental gradients.
Frederic Guillaume
A two-locus model of spatially varying stabilizing or directional selection on a quantitative trait
Ludwig Geroldinger
How can genetic interactions evolve in response to migration load?
Stephen Proulx
Community dynamics and the evolution of dispersal
Francois Massol
"The biogeography of adaptive radiations and the geographic overlap of sister species"
Mikael Pontarp
Rapid adaptation from standing variance and de novo mutation: a general deterministic approximation
Guillaume Martin
Epidemiological feedbacks aect evolutionary emergence of pathogens
Matthew Harteld, Samuel Alizon
Insights into the evolution of drug resistance from simple models
Troy Day
Modeling and simulation of low grade urinary bladder carcinoma
Svetlana Bunimovich
Numerical treatment of chemotaxis related heterogeneous dynamics arising in cancer invasion simulations
N. Kolbe, N. Sfakianakis, Lukacova Medvidova, N. Hellman, J. Katuchova
Mathematical models of cancer invasion of tissue: local and nonlocal interactions
Cristian Morales Rodrigo
On a multiscale model involving cell contractivity and its e_ects on tumor invasion
Christian Stinner
Computational modeling to assess guidelines, risk factors and cushions addressing sitting-acquired pressure ulcers
Amit Gefen
Variance-reduced simulation of individual-based models for tumor growth
Annelies Lejon, Giovanni Samaey
Mathematical modelling and numerical simulations of actin dynamics in the eukaryotic cell
Anotida Madzvamuse
Unraveling the occurrence of fracture non-unions with a multiscale bioregulatory model
Aurélie Carlier, Nick van Gastel, Geert Carmeliet, Hans Van Oosterwyck, Liesbet Geris
Mathematical modelling of wound infection implications to delayed wound healing
Etelvina Javierre, Fred Vermolen
On minimizers of the bending energy of two-phase biomembranes
Marco Veneroni
Radially Projected Finite Element Method on Evolving Surfaces
Necibe Tuncer
Identifying Optimal Treatment Protocols for the Treatment of a Bacterial Infection in a Chronic Ischemic Wound Using Hyperbaric Oxygen Therapy
Richard Schugart
Hybrid cell-based modeling of mechanical cell-matrix feedback during collective cell behavior
Roeland M.H Merks, Ren_e F.M. van Oers, Elisabeth G. Rens
Efficient data-driven simulation of infection spread in the Swedish cattle population
Stefan Widgren, Pavol Bauer, Stefan Engblom
Pathogen spread and control on the network of French cattle movements through coupling of intra- and inter-herd models
Elisabeta Vergu, Pauline Ezanno, B. L. Dutta
"Relevance of the Voronoi domain partition for position-jump reaction-diffusion processes on nonuniform rectilinear lattices"
Christian Yates
Mesoscopic Stochastic Modeling and the Diffusion Operator
Stefan Engblom
Stochastic simulation of di ffusion on unstructured meshes via first exit times.
Lina Meinecke
Modelling HIV virulence evolution in the context of immune escape
Christiaan H. van Dorp, Rob J. de Boer, Michiel van Boven
Disentangling human tolerance and resistance against HIV
Roland R. Regoes, Paul J. Mclaren, Manuel Battegay, Enos Bernasconi, Alexandra Calmy, Huldrych F. Günthard, Matthias Hoffmann, Andri Rauch, Amalio Telenti, Jacques Fellay
The coevolution of human antiviral protein APOBEC3G and HIV protein Vif: A theoretical study
Akira Sasaki
Immunology and epidemiology of hepatitis C virus: plenty of data for a nested model approach.
Fabio Luciani
Incorporating immunological dynamics in transmission models of varicella zoster virus (VZV) and cytomegalovirus (CMV)
Michiel van Boven, Alies van Lier, Marjolein Korndewal, Jacco Wallinga, Hester de Melker
Identifying host immune factors that drive epidemic dynamics in a multi-scale model of tuberculosis
Giorgio Guzzetta, Marco Ajelli, Denise Kirschner, Stefano Merle
Combining a within host model for immune response and waning immunity with a population level transmission model
Wilfred de Graaf
Backward bifurcations in a model coupling within-host and between-host dynamics
Zhilan Feng
Andrea Pugliese, Carmela Sinisgalli, Alberto Gandolfi
Investigation of a Nucleated-Polymerization Model applied to Polyglutamine Aggregation
Carola Kruse, Marie Doumic-Jauffret, H.Thomas Banks
Mathematical Modeling of Prion Aggregate Dynamics and Transmission in Yeast
Suzanne S. Sindi
Enzyme-Limited Nucleated Polymerization Model of Prion Aggregation
Jason Karl Davis, Suzanne S. Sindi
Simulation of cell mechanics in a micropipette aspiration experiment using a highly detail model
Paul van liedekerke, Johannes Neitsch, Bart Smeets, Tim Odenthal, Herman Ramon, Dirk Drasdo
Evolution of senescence in heterogeneous landscapes
Olivier Cotto